brown #
= weekly rock chart peak
blue #
= pop chart peak
| 1 | She Don't Use Jelly | 3 | Feb 1995 |  |
| 2 | Turn It On | Mar 1995 | |
| 3 | Race For The Prize | Jun 1999 | |
| 4 | Yoshimi Battles The Pink Robots Pt. 1 | Jan 2003 | |
| 5 | Fight Test | May 2003 | |
| 6 | The Golden Path | Sep 2003 | |
| The Chemical Brothers Featuring The Flaming Lips |
| 7 | The Yeah Yeah Yeah Song | Apr 2006 | |
| 8 | Peace Sword (Open Your Heart) | 2013 | |
| The Flaming Lips Featuring Tobacco |
| 9 | Lucy In The Sky With Diamonds | 2014 | |
| The Flaming Lips Featuring Miley Cyrus And Moby |